MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Streptococcus sp.
19428wC2_LYSM12
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 98
bases: 2,425,255 bps
CDS: 2,054
rRNA: 5
Repeat region:
tmRNA: 1
tRNA: 45
misc RNA:
Total features: 2,105
Total number of protein coding genes annotated/found:
2,054
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Items 21 - 40
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5036|JADGLD010000038.1
SEQF5036_01359
Genome Viewer
NA
AA
1266/422
401-1666
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
SEQF5036|JADGLD010000026.1
SEQF5036_00987
Genome Viewer
NA
AA
171/57
462-632
hypothetical protein
SEQF5036|JADGLD010000037.1
SEQF5036_01335
Genome Viewer
NA
AA
195/65
474-280
hypothetical protein
SEQF5036|JADGLD010000062.1
SEQF5036_01777
Genome Viewer
NA
AA
381/127
480-100
hypothetical protein
SEQF5036|JADGLD010000051.1
SEQF5036_01668
Genome Viewer
NA
AA
552/184
490-1041
hypothetical protein
SEQF5036|JADGLD010000018.1
SEQF5036_00496
Genome Viewer
NA
AA
321/107
510-190
hypothetical protein
SEQF5036|JADGLD010000027.1
SEQF5036_01019
Genome Viewer
NA
AA
840/280
557-1396
IS3 family transposase IS861
SEQF5036|JADGLD010000039.1
SEQF5036_01373
Genome Viewer
NA
AA
462/154
567-106
hypothetical protein
SEQF5036|JADGLD010000055.1
SEQF5036_01683
Genome Viewer
NA
AA
486/162
600-115
IS110 family transposase ISSsu10
SEQF5036|JADGLD010000040.1
SEQF5036_01485
Genome Viewer
NA
AA
1029/343
624-1652
Phosphate-binding protein PstS 2
SEQF5036|JADGLD010000030.1
SEQF5036_01203
Genome Viewer
NA
AA
492/164
638-147
putative protein
SEQF5036|JADGLD010000001.1
SEQF5036_00605
Genome Viewer
NA
AA
1161/387
650-1810
hypothetical protein
SEQF5036|JADGLD010000032.1
SEQF5036_01250
Genome Viewer
NA
AA
567/189
653-1219
hypothetical protein
SEQF5036|JADGLD010000033.1
SEQF5036_01268
Genome Viewer
NA
AA
1149/383
664-1812
N-acetylgalactosamine-6-phosphate deacetylase
SEQF5036|JADGLD010000018.1
SEQF5036_00497
Genome Viewer
NA
AA
930/310
665-1594
hypothetical protein
SEQF5036|JADGLD010000042.1
SEQF5036_01501
Genome Viewer
NA
AA
462/154
679-218
hypothetical protein
SEQF5036|JADGLD010000011.1
SEQF5036_00063
Genome Viewer
NA
AA
363/121
689-1051
hypothetical protein
SEQF5036|JADGLD010000046.1
SEQF5036_01530
Genome Viewer
NA
AA
108/36
769-662
hypothetical protein
SEQF5036|JADGLD010000030.1
SEQF5036_01204
Genome Viewer
NA
AA
1191/397
804-1994
putative protein
SEQF5036|JADGLD010000039.1
SEQF5036_01374
Genome Viewer
NA
AA
231/77
817-587
hypothetical protein
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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